NEW RECORD OF Mycena chlorophos (BIOLUMINESCENT FUNGI) FOR INDONESIA
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HIGHLIGHTS
- Glowing mushrooms were found at night in the forest of IPB University and showed a bright green light in the dark.
- Examination of their morphological features and phylogeny material confirmed they are the species Mycena chlorophos.
- This is the first confirmed record of Mycena chlorophos in Indonesia, extending its known distribution worldwide.
ABSTRACT
A bioluminescent fungus produce light as a result of a chemical reaction within its body. The majority of fungi exhibiting bioluminescence are classified within the Mycenaceae which comprises a significant proportion of the known glowing fungi. One of those species which well noted worldwide is Mycena chlorophos. However, no clear record of M. chlorophos has been discovered in Indonesia. While engaging in our routine late-night mushroom foraging in IPB University Campus Forest (IPBUCF), some glowing basidiomata were encountered. This study sought to determine the taxonomic classification of the collected specimens through comprehensive morphological and molecular examinations. The fresh fruiting bodies were underwent thorough examination based on macroscopic and microscopic characteristics. Phylogenetic analysis of the rDNA-ITS region was conducted using ITS 1/2 primers, and the integration of morphological and molecular data verified that our specimens belong to Mycena chlorophos. By morphology, our specimen poses convex pileus with shallow depression at centre, viscid, shiny, adnexed lamellae with series of lamellae, ellipsoid and smooth basidiospores. The pileus and hymenophore glow vividly with a bright greenish hue in the darkness. The BLAST analysis indicated a 98% similarity between our specimen and Mycena chlorophos from China, ranking it among the top matches. Furthermore, the phylogenetic tree positioned our specimens within the M. chlorophos clade with a 100% bootstrap support value. Our specimen was in sub clade with materials from Malaysia. The DNA sequence of our scpecimen has been registered to Gen Bank and can be used for future reference of bioluminescent fungi wordlwide. This research updates information regarding the distribution and characteristics of M. chlorophos in Indonesia. The discovery of this species in the IPBUCF adds to the known geographical range of M. chlorophos near the anthropogenic activity in Indonesia. In addition, our result also contributes to the growing documentation of bioluminescent fungi in Indonesia, a region with high but underexplored fungal biodiversity.
Armadhan WS, Sari SP, Aji MYMB, Permatasari DP, Amalia BW, Berlin GE, …, Setyawan AD. 2023. The macrofungal diversity and its potential from the karst forest of Kalipoh Village, Kebumen District, Indonesia. Asian J For 7(2):99–106. DOI: 10.13057/asianjfor/r070204 DOI: https://doi.org/10.13057/asianjfor/r070204
Arya CP, Ratheesh S, Pradeep CK. 2021. New record of luminescent Mycena chlorophos (Mycenaceae) from Western Ghats of India. Stud Fungi 6(1):507–13. DOI: 10.5943/sif/6/1/40 DOI: https://doi.org/10.5943/sif/6/1/40
Bechara EJH, Stevani CV. 2018. Brazilian bioluminescent beetles: Reflections on catching glimpses of light in the Atlantic Forest and Cerrado. An Acad Bras Ciên 90(1):663–79. DOI: 10.1590/0001-3765201820170504. DOI: https://doi.org/10.1590/0001-3765201820170504
Bessho-Uehara M, Francis WR, Haddock SHD. 2020. Biochemical characterization of diverse deep-sea anthozoan bioluminescence systems. Mar Biol. 167:114. DOI: 10.1007/s00227-020-03706-w DOI: https://doi.org/10.1007/s00227-020-03706-w
Chang C, Chen C, Lin W, Kao H. 2020. Mycena jingyinga, Mycena luguensis, and Mycena venus: Three new species of bioluminescent fungi from Taiwan. Taiwania 65(3):396–406. DOI: 10.6165/tai.2020.65.396
Chew AL, Desjardin DE, Tan YS, Musa MY, Sabaratnam V. 2014. Bioluminescent fungi from Peninsular Malaysia—a taxonomic and phylogenetic overview. Fungal Divers 70:149–87. DOI: 10.1007/s13225-014-0302-9 DOI: https://doi.org/10.1007/s13225-014-0302-9
Chew ALC, Tan YS, Desjardin DE, Musa MY, Sabaratnam V. 2013. Taxonomic and phylogenetic re-evaluation of Mycena illuminans. Mycologia 105(5):1325–35. DOI: 10.3852/13-009 DOI: https://doi.org/10.3852/13-009
Cortés-Pérez A, Desjardin DE, Perry BA, Ramírez-Cruz V, Ramírez-Guillén F, Villalobos-Arámbula AR, Rockefeller A. 2019. New species and records of bioluminescent Mycena from Mexico. Mycologia 111(2):319–38. DOI: 10.1080/00275514.2018.1554172 DOI: https://doi.org/10.1080/00275514.2018.1554172
Cortés-Pérez A, Guzmán-Dávalos L, Ramírez-Cruz V, Villalobos-Arámbula AR, Ruiz-Sanchez E, Ramírez-Guillén F. 2023. New species of bioluminescent Mycena Sect. Calodontes (Agaricales, Mycenaceae) from Mexico. J Fungi 9(9):902. DOI: 10.3390/jof9090902 DOI: https://doi.org/10.3390/jof9090902
Dauner LAP, Karunarathna SC, Tibpromma S, Xu J, Mortimer PE. 2021. Bioluminescent fungus Roridomyces viridiluminus sp. nov. and the first Chinese record of the genus Roridomyces, from Southwestern China. Phytotaxa 487(3):233–50. DOI: 10.11646/phytotaxa.487.3.4 DOI: https://doi.org/10.11646/phytotaxa.487.3.4
Deane GB, Stokes MD, Latz MI. 2015. Bubble stimulation efficiency of dinoflagellate bioluminescence. Luminescence 31(1):270–80. DOI: 10.1002/bio.2957 DOI: https://doi.org/10.1002/bio.2957
Desjardin DE, Oliveira AG, Stevani CV. 2008. Fungi bioluminescence revisited. Photochem Photobiol Sci 7:170–82. DOI: 10.1039/b713328f DOI: https://doi.org/10.1039/b713328f
Desjardin DE, Perry BA, Lodge DJ, Stevani CV, Nagasawa E. 2010. Luminescent Mycena: New and noteworthy species. Mycologia 102(2):459–77. DOI: 10.3852/09-197 DOI: https://doi.org/10.3852/09-197
Havey EN. 1957. A history of luminescence from the earliest times until 1900. Philadelphia (US): American Philosophical Society. DOI: https://doi.org/10.5962/bhl.title.14249
Heinzelmann R, Baggenstos H, Rudolf A. 2024. Is the bioluminescence in many Mycena species overlooked? - A case study from M. crocata in Switzerland. Mycoscience 65(4):173–9. DOI: 10.47371/mycosci.2024.03.001 DOI: https://doi.org/10.47371/mycosci.2024.03.001
Hennings P. 1903. Ein stark phosphoreszierender javanischer Agaricus (Mycena illuminans P. Henn. n. sp.) [A strongly phosphorescent Javanese Agaricus]. Hedwigia 42:309–10.
Karunarathna SC, Mortimer PE, Tibpromma S, Dutta AK, Paloi S, Hu Y, …, Lumyong S. 2020. Roridomyces phyllostachydis (Agaricales, Mycenaceae), a new bioluminescent fungus from Northeast India. Phytotaxa 459(2):155–67. DOI: 10.11646/phytotaxa.459.2.6 DOI: https://doi.org/10.11646/phytotaxa.459.2.6
Ke H-M, Tsai IJ. 2022. Understanding and using fungal bioluminescence – Recent progress and future perspectives. Current Opinion in Green and Sustainable Chemistry 33:100570. DOI: 10.1016/j.cogsc.2021.100570 DOI: https://doi.org/10.1016/j.cogsc.2021.100570
Koli Y, Umesh P, Mangesh M, Pravin S, Gurunath K. 2024. New distribution record of fungi Mycena chlorophos (Berk. & M.A.Curtis) Sacc. (Mycenaceae) from the Konkan region of Maharashtra, India. J Threat Taxa 16(4):25094–100. DOI: 10.11609/jott.8816.16.4.25094-25100 DOI: https://doi.org/10.11609/jott.8816.16.4.25094-25100
Kumar S, Stecher G, Li M, Knyaz C, Tamura K. 2018. Mega X: Molecular evolutionary genetics analysis across computing platforms. Mol Biol Evol 35:1547–49. DOI: 10.1093/molbev/msy096 DOI: https://doi.org/10.1093/molbev/msy096
Lu W, Priyashantha AKH, Galappaththi MCA, Tibpromma S, Dai D, Patabendige NM, …, Nimalrathna TS. 2024. Fungal bioluminescence: Past, present, and future. Diversity 16(539):1–20. DOI: 10.3390/d16090539 DOI: https://doi.org/10.3390/d16090539
Maas Geesteranus R. 1992. Mycenas of the northern hemisphere II. Conspectus of the Mycenas of the northern hemisphere. Verh Kon Ned Acad Wetensch, Afd Natuurk, Tweede Reeks 90:1–493.
Nimalrathna TS, Tibpromma S, Nakamura A, Galappaththi MCA, Xu J, Mortimer PE, Karunarathna SC. 2022. The case of the missing mushroom: A novel bioluminescent species discovered within Favolaschia in Southwestern China. Phytotaxa 539(3):244–56. DOI: 10.11646/ phytotaxa.539.3.3 DOI: https://doi.org/10.11646/phytotaxa.539.3.3
Oba Y, Hosaka Y. 2023. The luminous fungi of Japan. J Fungi 9(615):1–27. DOI: 10.3390/jof9060615 DOI: https://doi.org/10.3390/jof9060615
Oliveira JJS, Vargas-Isla R, Cabral TS, Cardoso JS, Andriolli FS, Rodrigues DP, …, Ishikawa NK. 2021. The Amazonian luminescent Mycena cristinae sp. nov. from Brazil. Mycoscience 62(6):395-405. DOI: 10.47371/mycosci.2021.05.004 DOI: https://doi.org/10.47371/mycosci.2021.05.004
Pegler DN. 1986. Agaric flora of Sri Lanka. Kew Bull Add Ser XII. Kew (UK): Royal Botanic Gardens. 519 p.
Perry BA, Desjardin DE, Stevani CV. 2024. Diversity, distribution, and evolution of bioluminescent fungi. J Fungi 11(1):19. DOI: 10.3390/jof11010019 DOI: https://doi.org/10.3390/jof11010019
Putra IP. 2021. Panduan karakterisasi jamur makroskopis di Indonesia: Bagian 1 - Deskripsi ciri makroskopis [A guide to mushroom characterization in Indonesia: Part 1 - Description of Macroscopic Features]. JPK Wallacea 10(1):25–37. DOI: 10.18330/jwallacea.2021.vol10iss1pp25-37 DOI: https://doi.org/10.18330/jwallacea.2021.vol10iss1pp25-37
Putra IP, Nurhayat OD, Mahardika WA, Sari OY. 2024. Recent collection of the poisonous mushroom, Clarkeinda trachodes (Berk.) for Indonesia. BIOTROPIA 31(1):114–22. DOI: 10.11598/btb.2024.31.1.2172 DOI: https://doi.org/10.11598/btb.2024.31.1.2172
Raja HA, Miller AN, Pearce CJ, Oberlies NH. 2017. Fungal identification using molecular tools: A primer for the natural products research community. J Nat Prod 80(3):756–70. DOI: 10.1021/acs.jnatprod.6b01085 DOI: https://doi.org/10.1021/acs.jnatprod.6b01085
Ramesh C, Meyer-Rochow VB. 2021. Bioluminescence in aquatic and terrestrial organisms elicited through various kinds of stimulation. Aquat Ecol 55(3):737–64. DOI: 10.1007/s10452-021-09875-0 DOI: https://doi.org/10.1007/s10452-021-09875-0
Stephenson SL. 2010. The kingdom fungi: The biology of mushrooms, molds, and lichens. Portland (US): Timber Press. 272 p.
Wei R, Ge Y, Qi L, Han M, Zeng H, Hu Y, …, Na Q. 2024. Revealing brownish Mycena diversity in China: New discoveries and taxonomic insights. J Fungi 10(6):439. DOI: 10.3390/jof10060439 DOI: https://doi.org/10.3390/jof10060439
Weitz HJ, Ballard AL, Campbell CD, Killham K. 2001. The effect of culture conditions on the mycelial growth and luminescence of naturally bioluminescent fungi. FEMS Microbiol Lett 202(2):165–70. DOI: 10.1111/j.1574-6968.2001.tb10798.x DOI: https://doi.org/10.1111/j.1574-6968.2001.tb10798.x
White TJ, Burns T, Lee S, Taylor J. 1990. Amplification and direct sequencing of fungal ribosomal RNAgenes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ (Editors), PCR Protocols: A Guide to Methods and Applications. San Diego (US): Academic Press, Inc, p. 315–22. DOI: https://doi.org/10.1016/B978-0-12-372180-8.50042-1
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